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5x ssct  (Thermo Fisher)


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    Structured Review

    Thermo Fisher 5x ssct
    5x Ssct, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/5x+ssct/SSC+buffer/bio_rxiv__64898__2026__03__20__713209-231-20-24
    Average 97 stars, based on 1 article reviews
    5x ssct - by Bioz Stars, 2026-09
    97/100 stars

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    Related Articles

    Labeling:

    Article Title: Convergent flow-mediated mesenchymal force drives embryonic foregut constriction and splitting
    Article Snippet: .. Labeled samples were washed twice with the wash buffer, then twice with 5X SSCT (5X Saline-Sodium Citrate buffer [Invitrogen, 15557044] and 0.1% Tween 20 [Sigma-Aldrich, P9416] diluted in PBS), and finally with the HCR amplification buffer (Molecular Instruments), 20 minutes each at room temperature. .. The HCR amplifiers with Alexa Fluor 647 or Alexa Fluor 546 (Molecular Instruments) were denatured at 95°C for 90 seconds and annealed at room temperature for 30 minutes.

    Article Title: Convergent flow-mediated mesenchymal force drives embryonic foregut constriction and splitting
    Article Snippet: .. Labeled samples were washed twice with the wash buffer, then twice with 5X SSCT (5X Saline-Sodium Citrate buffer [Invitrogen, 15557044] and 0.1% Tween 20 [Sigma-Aldrich, P9416] diluted in PBS), and finally with the HCR amplification buffer (Molecular Instruments), 20 min each at room temperature. .. The HCR amplifiers with Alexa Fluor 647 or Alexa Fluor 546 (Molecular Instruments) were denatured at 95 °C for 90 s and annealed at room temperature for 30 min.

    Saline:

    Article Title: Convergent flow-mediated mesenchymal force drives embryonic foregut constriction and splitting
    Article Snippet: .. Labeled samples were washed twice with the wash buffer, then twice with 5X SSCT (5X Saline-Sodium Citrate buffer [Invitrogen, 15557044] and 0.1% Tween 20 [Sigma-Aldrich, P9416] diluted in PBS), and finally with the HCR amplification buffer (Molecular Instruments), 20 minutes each at room temperature. .. The HCR amplifiers with Alexa Fluor 647 or Alexa Fluor 546 (Molecular Instruments) were denatured at 95°C for 90 seconds and annealed at room temperature for 30 minutes.

    Article Title: Convergent flow-mediated mesenchymal force drives embryonic foregut constriction and splitting
    Article Snippet: .. Labeled samples were washed twice with the wash buffer, then twice with 5X SSCT (5X Saline-Sodium Citrate buffer [Invitrogen, 15557044] and 0.1% Tween 20 [Sigma-Aldrich, P9416] diluted in PBS), and finally with the HCR amplification buffer (Molecular Instruments), 20 min each at room temperature. .. The HCR amplifiers with Alexa Fluor 647 or Alexa Fluor 546 (Molecular Instruments) were denatured at 95 °C for 90 s and annealed at room temperature for 30 min.

    Amplification:

    Article Title: Convergent flow-mediated mesenchymal force drives embryonic foregut constriction and splitting
    Article Snippet: .. Labeled samples were washed twice with the wash buffer, then twice with 5X SSCT (5X Saline-Sodium Citrate buffer [Invitrogen, 15557044] and 0.1% Tween 20 [Sigma-Aldrich, P9416] diluted in PBS), and finally with the HCR amplification buffer (Molecular Instruments), 20 minutes each at room temperature. .. The HCR amplifiers with Alexa Fluor 647 or Alexa Fluor 546 (Molecular Instruments) were denatured at 95°C for 90 seconds and annealed at room temperature for 30 minutes.

    Article Title: Multi-tissue transcriptomic aging atlas reveals predictive aging biomarkers in the killifish
    Article Snippet: Next, the sections were post-fixed using 4% paraformaldehyde (diluted from 32% paraformaldehyde [Electron Microscopy Sciences 15714-S] in PBS) at room temperature for 15 min, followed by the four 500 μL PBST washes, with 5 min incubation between each wash, and then prehybridized. .. After prehybridization, the buffer was removed, and 100 μL hybridization buffer (for each HCR probe, use 1 μL of the 0.5 pmol/μL stock per 100 μL hybridization buffer) was added to each slide, followed by 37°C incubation for 16-20 h. After hybridization, each slide was washed with 500 μL HCR probe wash buffer (Molecular Instruments, buffer type: tissue section), 500 μL 75% wash buffer (75% HCR probe wash buffer, 25% 5x SSCT), 500 μL 50% wash buffer (50% HCR probe wash buffer, 50% 5x SSCT), 500 μL 25% wash buffer (25% HCR probe wash buffer, 75% 5x SSCT), and 500 μL 5x SSCT (diluted from 20x SSCT [Ambion AM9770] with nuclease-free water) at 37°C with 15 min-incubation for each wash. Next, each slide was incubated in 200 μL HCR amplification buffer (Molecular Instruments, buffer type: tissue section) for 30 min – 4 h before switching to 100 μL amplification buffer supplemented with the fluorescent hairpin pairs (prepared according to the manufacturer’s instructions) for 20-24 h incubation at room temperature in the dark. ..

    Article Title: Convergent flow-mediated mesenchymal force drives embryonic foregut constriction and splitting
    Article Snippet: .. Labeled samples were washed twice with the wash buffer, then twice with 5X SSCT (5X Saline-Sodium Citrate buffer [Invitrogen, 15557044] and 0.1% Tween 20 [Sigma-Aldrich, P9416] diluted in PBS), and finally with the HCR amplification buffer (Molecular Instruments), 20 min each at room temperature. .. The HCR amplifiers with Alexa Fluor 647 or Alexa Fluor 546 (Molecular Instruments) were denatured at 95 °C for 90 s and annealed at room temperature for 30 min.

    Article Title: An in vivo CRISPR screen in chick embryos reveals a role for MLLT3 in specification of neural cells from the caudal epiblast.
    Article Snippet: Embryos were then stepwise rehydrated by 25% steps of PBST (0.1% Tween 20, Sigma P2282) on ice, treated with protease K (VWR International, A3830.0500), and fixed again with 4% PFA for an additional 20 minutes at room temperature. .. Embryos were then transferred to 5x SSCT (SSC buffer with 0.1% Tween 20, Invitrogen 15557-044), pre-hybridized for 30min at 37°C with probe hybridization buffer (Molecular Instruments), incubated for 14 hours with 2pmol of probe, washed 4 times with 5x SSCT, pre-amplified with amplification buffer (Molecular Instruments) for 5 min at room temperature, incubated for 14 hours with hairpin solution in the dark at room temperature, and finally washed 4 times with 5x SSCT. ..

    Hybridization:

    Article Title: Multi-tissue transcriptomic aging atlas reveals predictive aging biomarkers in the killifish
    Article Snippet: Next, the sections were post-fixed using 4% paraformaldehyde (diluted from 32% paraformaldehyde [Electron Microscopy Sciences 15714-S] in PBS) at room temperature for 15 min, followed by the four 500 μL PBST washes, with 5 min incubation between each wash, and then prehybridized. .. After prehybridization, the buffer was removed, and 100 μL hybridization buffer (for each HCR probe, use 1 μL of the 0.5 pmol/μL stock per 100 μL hybridization buffer) was added to each slide, followed by 37°C incubation for 16-20 h. After hybridization, each slide was washed with 500 μL HCR probe wash buffer (Molecular Instruments, buffer type: tissue section), 500 μL 75% wash buffer (75% HCR probe wash buffer, 25% 5x SSCT), 500 μL 50% wash buffer (50% HCR probe wash buffer, 50% 5x SSCT), 500 μL 25% wash buffer (25% HCR probe wash buffer, 75% 5x SSCT), and 500 μL 5x SSCT (diluted from 20x SSCT [Ambion AM9770] with nuclease-free water) at 37°C with 15 min-incubation for each wash. Next, each slide was incubated in 200 μL HCR amplification buffer (Molecular Instruments, buffer type: tissue section) for 30 min – 4 h before switching to 100 μL amplification buffer supplemented with the fluorescent hairpin pairs (prepared according to the manufacturer’s instructions) for 20-24 h incubation at room temperature in the dark. ..

    Article Title: An in vivo CRISPR screen in chick embryos reveals a role for MLLT3 in specification of neural cells from the caudal epiblast.
    Article Snippet: Embryos were then stepwise rehydrated by 25% steps of PBST (0.1% Tween 20, Sigma P2282) on ice, treated with protease K (VWR International, A3830.0500), and fixed again with 4% PFA for an additional 20 minutes at room temperature. .. Embryos were then transferred to 5x SSCT (SSC buffer with 0.1% Tween 20, Invitrogen 15557-044), pre-hybridized for 30min at 37°C with probe hybridization buffer (Molecular Instruments), incubated for 14 hours with 2pmol of probe, washed 4 times with 5x SSCT, pre-amplified with amplification buffer (Molecular Instruments) for 5 min at room temperature, incubated for 14 hours with hairpin solution in the dark at room temperature, and finally washed 4 times with 5x SSCT. ..

    Incubation:

    Article Title: Multi-tissue transcriptomic aging atlas reveals predictive aging biomarkers in the killifish
    Article Snippet: Next, the sections were post-fixed using 4% paraformaldehyde (diluted from 32% paraformaldehyde [Electron Microscopy Sciences 15714-S] in PBS) at room temperature for 15 min, followed by the four 500 μL PBST washes, with 5 min incubation between each wash, and then prehybridized. .. After prehybridization, the buffer was removed, and 100 μL hybridization buffer (for each HCR probe, use 1 μL of the 0.5 pmol/μL stock per 100 μL hybridization buffer) was added to each slide, followed by 37°C incubation for 16-20 h. After hybridization, each slide was washed with 500 μL HCR probe wash buffer (Molecular Instruments, buffer type: tissue section), 500 μL 75% wash buffer (75% HCR probe wash buffer, 25% 5x SSCT), 500 μL 50% wash buffer (50% HCR probe wash buffer, 50% 5x SSCT), 500 μL 25% wash buffer (25% HCR probe wash buffer, 75% 5x SSCT), and 500 μL 5x SSCT (diluted from 20x SSCT [Ambion AM9770] with nuclease-free water) at 37°C with 15 min-incubation for each wash. Next, each slide was incubated in 200 μL HCR amplification buffer (Molecular Instruments, buffer type: tissue section) for 30 min – 4 h before switching to 100 μL amplification buffer supplemented with the fluorescent hairpin pairs (prepared according to the manufacturer’s instructions) for 20-24 h incubation at room temperature in the dark. ..

    Article Title: An in vivo CRISPR screen in chick embryos reveals a role for MLLT3 in specification of neural cells from the caudal epiblast.
    Article Snippet: Embryos were then stepwise rehydrated by 25% steps of PBST (0.1% Tween 20, Sigma P2282) on ice, treated with protease K (VWR International, A3830.0500), and fixed again with 4% PFA for an additional 20 minutes at room temperature. .. Embryos were then transferred to 5x SSCT (SSC buffer with 0.1% Tween 20, Invitrogen 15557-044), pre-hybridized for 30min at 37°C with probe hybridization buffer (Molecular Instruments), incubated for 14 hours with 2pmol of probe, washed 4 times with 5x SSCT, pre-amplified with amplification buffer (Molecular Instruments) for 5 min at room temperature, incubated for 14 hours with hairpin solution in the dark at room temperature, and finally washed 4 times with 5x SSCT. ..



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